Download DiSNPindel v1.0.zip

DiSNPindel is a free package to academic users. It provides a simple yet efficient solution to automatically find intra-individual single nucleotide polymorphisms (SNPs) and insertion/deletion polymorphisms (Indels)in direct amplicon sequencing of a diploid sample. It is able to analyze single .ab1 and/or .scf chromatogram files.

DiSNPindel is developed by

·College of Engineering, South China Agricultural University, China

·State Key Laboratory of Tree Genetics and Breeding, Chinese Academy of Forestry, China

·Department of Computer Science, Guangdong University of Science and Technology, China

·Research Institute of Tropical Forestry, Chinese Academy of Forestry, China

How to cite DiSNPindel

Deng J, Huang H, Yu X, Jin J, Lin W, Li F, Song Z, Li M and Gan S. 2015. DiSNPindel: improved intra-individual SNP and InDel detection in direct amplicon sequencing of a diploid. BMC Bioinformatics (submitted).